OmicsExampleData: Omics example dataset.

In MarenS2/pwOmics_maren: Pathway-based data integration of omics data

Description

A dataset as input example for readOmics: A list containing two input lists, one for protein data, one for gene data, both including a vector of all measured IDs as first element and a list as second element including for each tp a dataframe with IDs and log foldchanges per timepoint.

Usage

data(OmicsExampleData)

Format

A list with a 'P' sublist containing protein data and a 'G' sublist containing gene/transcript data. Each of the sublists has a first element with all measured protein/gene IDs and a second element with a list of the length of the number of measured time points. Each of these lists contains a dataframe with a first column of significant protein/gene IDs at that time point and a second column with the corresponding logFCs.

Value

List with 2 sublists.

MarenS2/pwOmics_maren documentation built on May 6, 2019, 3:27 p.m.