plotSummaryStats: Plot summary statistics
In LTLA/fugi: Further Utilities for Genomic Interactions
Description
Usage
Arguments
Value
Examples
Description
Makes summary plots of the counts, interaction distances, interaction annotations,
and percentage of cis and trans interactions for a GenomicInteractions object.
Usage
1
plotSummaryStats(GIObject, other = 5, cut = 10)
Arguments
GIObject
A GenomicInteractions object.
other
Numeric scalar passed to plotInteractionAnnotations.
cut
Numeric scalar passed to plotCounts.
Value
A plot is made on the current graphics device.
The output of marrangeGrob is returned.
Examples
1
2
3
data(hic_example_data)
hic_example_data <- updateObject(hic_example_data)
plotSummaryStats(hic_example_data)
LTLA/fugi documentation built on June 22, 2019, 8:50 p.m.
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Description Usage Arguments Value Examples
Description
Makes summary plots of the counts, interaction distances, interaction annotations, and percentage of cis and trans interactions for a GenomicInteractions object.
Usage
1 | plotSummaryStats(GIObject, other = 5, cut = 10)
|
Arguments
GIObject |
A GenomicInteractions object. |
other |
Numeric scalar passed to |
cut |
Numeric scalar passed to |
Value
A plot is made on the current graphics device.
The output of marrangeGrob is returned.
Examples
1 2 3 | data(hic_example_data)
hic_example_data <- updateObject(hic_example_data)
plotSummaryStats(hic_example_data)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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