pancreas: Pancreas scRNA-seq data
In JEFworks-Lab/veloviz: VeloViz: RNA-velocity informed 2D embeddings for visualizing cell state trajectories
pancreas R Documentation
Pancreas scRNA-seq data
Description
Pancreatic endocrinogenesis scRNA-seq from Bastidas-Ponce et. al.,
Development 2019 accessed via scVelo package and
subsampled to 739 cells.
Usage
pancreas
Format
list of 4 objects:
- spliced
matrix, 7192 genes x 739 cells of spliced counts
- unspliced
matrix, 7192 genes x 739 cells of unspliced counts
- pcs
matrix, 739 x 50 cell scores in 50 PCs
- clusters
factor of cell type annotations from scVelo
Source
JEFworks-Lab/veloviz documentation built on Sept. 14, 2022, 4:03 p.m.
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| pancreas | R Documentation |
Pancreas scRNA-seq data
Description
Pancreatic endocrinogenesis scRNA-seq from Bastidas-Ponce et. al., Development 2019 accessed via scVelo package and subsampled to 739 cells.
Usage
pancreas
Format
list of 4 objects:
- spliced
matrix, 7192 genes x 739 cells of spliced counts
- unspliced
matrix, 7192 genes x 739 cells of unspliced counts
- pcs
matrix, 739 x 50 cell scores in 50 PCs
- clusters
factor of cell type annotations from scVelo
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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