PlotiRTScore: Score vs retention time of the iRT peptides
In BioAlvaro/MQviewer: Quality Control of Protemics Data
Description
Usage
Arguments
Value
Examples
Description
Score vs retention time of the iRT peptides
Usage
1
PlotiRTScore(MQCombined, tolerance = 0.001, plots_per_page = 5)
Arguments
MQCombined
Object list containing all the files from the MaxQuant
output. It is the result from using make_MQCombined.
tolerance
Error maximum to find the iRT peptides by m/z value.
by default is 0.001.
plots_per_page
Establish the maximum number of plots per page.#'
Value
A plot for each sample showing a linear regression of the
iRT peptides'
retention time vs the score.
Examples
1
2
3
MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
MQCombined <- make_MQCombined(MQPathCombined)
PlotiRT(MQCombined)
BioAlvaro/MQviewer documentation built on Jan. 11, 2022, 8:25 p.m.
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Description Usage Arguments Value Examples
Description
Score vs retention time of the iRT peptides
Usage
1 | PlotiRTScore(MQCombined, tolerance = 0.001, plots_per_page = 5)
|
Arguments
MQCombined |
Object list containing all the files from the MaxQuant
output. It is the result from using |
tolerance |
Error maximum to find the iRT peptides by m/z value. by default is 0.001. |
plots_per_page |
Establish the maximum number of plots per page.#' |
Value
A plot for each sample showing a linear regression of the iRT peptides' retention time vs the score.
Examples
1 2 3 | MQPathCombined <- system.file("extdata/combined/", package = "MQmetrics")
MQCombined <- make_MQCombined(MQPathCombined)
PlotiRT(MQCombined)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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