subsetCase: subsets the imcExperiment to a case along with all slots for...
In imcExperiment: Mass Cytometry S4 Class Structure Pipeline for Images
Description
Usage
Arguments
Value
Examples
Description
subsets the imcExperiment to a case along with all slots for a single ROI, using for distance analysis
method to subset the slots, requires colData with column "ROIID"
Usage
1
2
3
4
subsetCase(object, value, ...)
## S4 method for signature 'imcExperiment'
subsetCase(object, value)
Arguments
object
IMC container
value
this is ROIID a single character ID
...
additional parameters
Value
returns IMC object of a single case
roi imcExperiment
Examples
1
2
3
4
5
6
data(imcdata)
myCase<-subsetCase(imcdata,"30-BM16-202_7Pre_s1_p1_r4_a4_ac")
myCase
data(imcdata)
myCase<-subsetCase(imcdata,"30-BM16-202_7Pre_s1_p1_r4_a4_ac")
myCase
imcExperiment documentation built on Aug. 19, 2021, 5:07 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
subsets the imcExperiment to a case along with all slots for a single ROI, using for distance analysis
method to subset the slots, requires colData with column "ROIID"
Usage
1 2 3 4 | subsetCase(object, value, ...)
## S4 method for signature 'imcExperiment'
subsetCase(object, value)
|
Arguments
object |
IMC container |
value |
this is ROIID a single character ID |
... |
additional parameters |
Value
returns IMC object of a single case
roi imcExperiment
Examples
1 2 3 4 5 6 | data(imcdata)
myCase<-subsetCase(imcdata,"30-BM16-202_7Pre_s1_p1_r4_a4_ac")
myCase
data(imcdata)
myCase<-subsetCase(imcdata,"30-BM16-202_7Pre_s1_p1_r4_a4_ac")
myCase
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.