setRestructor.AffymetrixCdfFile: Specifies a function through which

In aroma.affymetrix: Analysis of Large Affymetrix Microarray Data Sets

Specifies a function through which

Description

Specifies a function through which of all or a subset of the units.

Usage

## S3 method for class 'AffymetrixCdfFile'
setRestructor(this, fcn=NULL, ...)

Arguments

...	Additional arguments passed to readCdfCellIndices.

Value

Returns the list structure returned by readCdfCellIndices.

Requirements

The reconstructor function have to:

1. Accept a list structure as its first argument.

2. Require no other arguments.

3. Return a list structure of identical length as the input one. In other words, it must not change the number of units nor the order of units.

The reconstructor function may:

1. Rearrange the groups or change the number of groups, for instance by utilizing applyCdfGroups.

2. Exclude some cells, for instance by excluding MMs.

See Also

For more information see AffymetrixCdfFile.

aroma.affymetrix documentation built on May 29, 2024, 4:32 a.m.