API for wavClusteR
Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data
| Global functions | |
|---|---|
| annotateClusters | Man page Source code |
| computeLogOdds | Source code |
| computePosterior | Source code |
| computelogOdds | Source code |
| estimateFDR | Man page Source code |
| estimateP | Source code |
| exportClusters | Man page Source code |
| exportCoverage | Man page Source code |
| exportGR | Source code |
| exportHighConfSub | Man page Source code |
| exportSequences | Man page Source code |
| filterClusters | Man page Source code |
| filterClustersCWT | Source code |
| filterClustersMRN | Source code |
| fitMixtureModel | Man page Source code |
| getAllSub | Man page Source code |
| getClusters | Man page Source code |
| getClustersMRN | Source code |
| getComplSubst | Source code |
| getCountTable | Source code |
| getCoverageAtSubst | Source code |
| getExpInterval | Man page Source code |
| getHighConfSub | Man page Source code |
| getLogOdd | Source code |
| getMetaCoverage | Man page Source code |
| getMetaGene | Man page Source code |
| getMetaTSS | Man page Source code |
| getOdd | Source code |
| getSEcoverage | Source code |
| getWindow | Source code |
| learnThreshold | Source code |
| model | Man page |
| plotSizeDistribution | Man page Source code |
| plotStatistics | Man page Source code |
| plotSubstitutions | Man page Source code |
| processChunk | Source code |
| processMD | Source code |
| readSortedBam | Man page Source code |
| wavClusteR | Man page |
| wavClusteR-package | Man page |
