splatSimDE: Simulate group differential expression
In splatter: Simple Simulation of Single-cell RNA Sequencing Data
Description
Usage
Arguments
Value
Description
Simulate differential expression. Differential expression factors for each
group are produced using getLNormFactors and these are added
along with updated means for each group. For paths care is taken to make sure
they are simulated in the correct order.
Usage
1
2
3
splatSimGroupDE(sim, params)
splatSimPathDE(sim, params)
Arguments
sim
SingleCellExperiment to add differential expression to.
params
splatParams object with simulation parameters.
Value
SingleCellExperiment with simulated differential expression.
splatter documentation built on Dec. 3, 2020, 2:01 a.m.
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Description Usage Arguments Value
Description
Simulate differential expression. Differential expression factors for each
group are produced using getLNormFactors and these are added
along with updated means for each group. For paths care is taken to make sure
they are simulated in the correct order.
Usage
1 2 3 | splatSimGroupDE(sim, params)
splatSimPathDE(sim, params)
|
Arguments
sim |
SingleCellExperiment to add differential expression to. |
params |
splatParams object with simulation parameters. |
Value
SingleCellExperiment with simulated differential expression.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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