splatPopSimMeans: Simulate mean gene expression matrix without eQTL effects
In splatter: Simple Simulation of Single-cell RNA Sequencing Data
Description
Usage
Arguments
Value
View source: R/splatPop-simulate.R
Description
Gene mean expression levels are assigned to each gene for each pair randomly
from a normal distribution parameterized using the mean and cv assigned to
each gene in the key.
Usage
1
splatPopSimMeans(vcf, key)
Arguments
vcf
VariantAnnotation object containing genotypes of samples.
key
Partial splatPop key data.frame.
Value
matrix of gene mean expression levels WITHOUT eQTL effects.
splatter documentation built on Dec. 3, 2020, 2:01 a.m.
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Description Usage Arguments Value
View source: R/splatPop-simulate.R
Description
Gene mean expression levels are assigned to each gene for each pair randomly from a normal distribution parameterized using the mean and cv assigned to each gene in the key.
Usage
1 | splatPopSimMeans(vcf, key)
|
Arguments
vcf |
VariantAnnotation object containing genotypes of samples. |
key |
Partial splatPop key data.frame. |
Value
matrix of gene mean expression levels WITHOUT eQTL effects.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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