compute_kernel_matrix: Computes kernel matrix

Description Usage Arguments Value

View source: R/train_encoder_multi.R

Description

Adds the defined kernel to the operation graph for high dimensional pairwise data similarity

Usage

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compute_kernel_matrix(data, data_shape, labels = NULL, method = NULL,
  perplexity = 30, diag = "zero")

Arguments

data

cell x feature data matrix

data_shape

number of features for data

labels

cell x 1 annotation (label) vector

method

Kernel to compute pairwise cell similarity

perplexity

neighborhood parameter for gaussian kernel

diag

indicator for self similarity

Value

Tensorflow op


scAlign documentation built on April 28, 2020, 6:10 p.m.