singleDiffAnalyses: Perform statistical analysis on a given splicing event

In psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Description

Perform statistical analyses on a given vector containing elements from different groups

Usage

singleDiffAnalyses(
  vector,
  group,
  threshold = 1,
  step = 100,
  analyses = c("wilcoxRankSum", "ttest", "kruskal", "levene", "fligner")
)

Arguments

vector	Numeric
group	Character: group of each element in the vector
threshold	Integer: minimum number of values per group
step	Numeric: number of events before the progress bar is updated (a bigger number allows for a faster execution)
analyses	Character: analyses to perform (see Details)

Details

The following statistical analyses may be performed by including the respective string in the analysis argument:

• ttest - Unpaired t-test (2 groups)

• wilcoxRankSum - Wilcoxon Rank Sum test (2 groups)

• kruskal - Kruskal test (2 or more groups)

• levene - Levene's test (2 or more groups)

• fligner - Fligner-Killeen test (2 or more groups)

Value

A row from a data frame with the results

psichomics documentation built on Nov. 8, 2020, 5:44 p.m.