analysesTableSet: Set of functions to render differential analyses (plot and...

In psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Description

Set of functions to render differential analyses (plot and table)

Set up environment and redirect user to a page based on click information

Usage

analysesTableSet(
  session,
  input,
  output,
  analysesType,
  analysesID,
  getAnalysesData,
  getAnalysesFiltered,
  setAnalysesFiltered,
  getAnalysesSurvival,
  getAnalysesColumns,
  setAnalysesColumns,
  getResetPaging,
  setResetPaging
)

processClickRedirection(click, psi = NULL, survival = FALSE)

analysesPlotSet(
  session,
  input,
  output,
  analysesType,
  analysesID,
  getAnalysesData,
  getAnalysesFiltered,
  getAnalysesSurvival
)

Arguments

session	Shiny session
input	Shiny input
output	Shiny output
analysesType	Character: type of analyses (GE or PSI)
analysesID	Character: identifier
getAnalysesData	Function: get analyses data
getAnalysesFiltered	Function: get filtered analyses data
setAnalysesFiltered	Function: set filtered analyses data
getAnalysesSurvival	Function: get survival data
getAnalysesColumns	Function: get columns
setAnalysesColumns	Function: set columns
getResetPaging	Function: get toggle of reset paging
setResetPaging	Function: set toggle of reset paging
click	List: click information
psi	Data frame or matrix: alternative splicing quantification
survival	Boolean: redirect to survival page?

Value

NULL (function is only used to modify the Shiny session's state or internal variables)

psichomics documentation built on Nov. 8, 2020, 5:44 p.m.