queryEnsembl: Query the Ensembl REST API
In psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation
Description
Usage
Arguments
Value
Examples
View source: R/analysis_information.R
Description
Query the Ensembl REST API
Usage
1
queryEnsembl(path, query, grch37 = TRUE)
Arguments
path
Character: API path
query
Character: API query
grch37
Boolean: query the Ensembl GRCh37 API? if FALSE, query
the most recent API
Value
Parsed response or NULL if no response
Examples
1
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path <- "overlap/region/human/7:140424943-140624564"
query <- list(feature = "gene")
psichomics:::queryEnsembl(path, query, grch37 = TRUE)
path <- "lookup/symbol/human/BRCA2"
query <- list(expand=1)
psichomics:::queryEnsembl(path, query, grch37 = TRUE)
psichomics documentation built on Nov. 8, 2020, 5:44 p.m.
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Description Usage Arguments Value Examples
View source: R/analysis_information.R
Description
Query the Ensembl REST API
Usage
1 | queryEnsembl(path, query, grch37 = TRUE)
|
Arguments
path |
Character: API path |
query |
Character: API query |
grch37 |
Boolean: query the Ensembl GRCh37 API? if |
Value
Parsed response or NULL if no response
Examples
1 2 3 4 5 6 7 | path <- "overlap/region/human/7:140424943-140624564"
query <- list(feature = "gene")
psichomics:::queryEnsembl(path, query, grch37 = TRUE)
path <- "lookup/symbol/human/BRCA2"
query <- list(expand=1)
psichomics:::queryEnsembl(path, query, grch37 = TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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