loadLocalFiles: Load local files

In psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Description

Load local files

Usage

loadLocalFiles(
  folder,
  ignore = c(".aux.", ".mage-tab."),
  name = "Data",
  verbose = FALSE
)

Arguments

folder	Character: path to folder containing files of interest
ignore	Character: skip folders and filenames that match the expression
name	Character: name of the category containing all loaded datasets
verbose	Boolean: detail steps while parsing?

Value

List of data frames from valid files

See Also

Other functions to load data: loadGtexData(), loadSRAproject(), loadTCGAdata()

Examples

## Not run: 
folder <- "~/Downloads/ACC 2016"
data <- loadLocalFiles(folder)

ignore <- c(".aux.", ".mage-tab.", "junction quantification")
loadLocalFiles(folder, ignore)

## End(Not run)

Example output

Loading required package: shiny
Loading required package: shinyBS
Start the visual interface by running the function psichomics()
Warning message:
In read.dcf(con) :
  URL 'http://bioconductor.org/BiocInstaller.dcf': status was 'Couldn't resolve host name'
Searching inside the folder... 0
Searching inside the folder... 0
$Data
named list()

psichomics documentation built on Nov. 8, 2020, 5:44 p.m.