Files in infercnv
Infer Copy Number Variation from Single-Cell RNA-Seq Data
README.md
infercnv documentation built on Nov. 8, 2020, 11:10 p.m.
NAMESPACE
DESCRIPTION
LICENSE
build/vignette.rds
data/infercnv_object_example.rda
data/infercnv_data_example.rda
data/mcmc_obj.rda
data/infercnv_genes_example.rda
data/infercnv_annots_example.rda
data/HMM_states.rda
R/infercnv_sampling.R
R/inferCNV_meanVarSim.R
R/inferCNV.R
R/noise_reduction.R
R/inferCNV_constants.R
R/inferCNV_heatmap.R
R/inferCNV_tumor_subclusters.R
R/SplatterScrape.R
R/inferCNV_HMM.R
R/inferCNV_tumor_subclusters.random_smoothed_trees.R
R/inferCNV_ops.R
R/inferCNV_simple_sim.R
R/inferCNV_hidden_spike.R
R/inferCNV_BayesNet.R
R/seurat_interaction.R
R/data.R
R/inferCNV_mask_non_DE.R
R/inferCNV_i3HMM.R
vignettes/inferCNV.Rmd
man/MCMC_inferCNV-class.Rd
man/filterHighPNormals.Rd
man/infercnv_genes_example.Rd
man/add_to_seurat.Rd
man/CreateInfercnvObject.Rd
man/plot_per_group.Rd
man/infercnv-class.Rd
man/infercnv_data_example.Rd
man/color.palette.Rd
man/infercnv_object_example.Rd
man/validate_infercnv_obj.Rd
man/infercnv_annots_example.Rd
man/HMM_states.Rd
man/mcmc_obj.Rd
man/plot_cnv.Rd
man/infercnv-package.Rd
man/sample_object.Rd
man/apply_median_filtering.Rd
man/inferCNVBayesNet.Rd
man/run.Rd
tests/testthat.R
tests/testthat/test_infer_cnv.R
inst/BUGS_Mixture_Model
inst/NEWS
inst/CITATION
inst/BUGS_Mixture_Model_i3
inst/doc/inferCNV.R
inst/doc/inferCNV.html
inst/doc/inferCNV.Rmd
inst/extdata/gencode_downsampled.EXAMPLE_ONLY_DONT_REUSE.txt
inst/extdata/oligodendroglioma_expression_downsampled.counts.matrix.gz
inst/extdata/oligodendroglioma_annotations_downsampled.txt
inst/script/README.txt
