top_rows_overlap-ConsensusPartitionList-method: Overlap of top rows from different top-value methods
In cola: A Framework for Consensus Partitioning

Description Usage Arguments Value Author(s) See Also Examples

Overlap of top rows from different top-value methods

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## S4 method for signature 'ConsensusPartitionList'
top_rows_overlap(object, top_n = min(object@list[[1]]@top_n),
    method = c("euler", "upset", "venn", "correspondance"), fill = NULL, ...)

`object`	A `ConsensusPartitionList-class` object.
`top_n`	Number of top rows.
`method`	`euler`: plot Euler diagram by `euler`; `upset`: draw the Upset plot by `UpSet`; `venn`: plot Venn diagram by `venn`; `correspondance`: use `correspond_between_rankings`.
`fill`	Filled color for the Euler diagram. The value should be a color vector. Transparency of 0.5 are added internally.
`...`	Additional arguments passed to `plot.euler`, `UpSet` or `correspond_between_rankings`.

No value is returned.

Zuguang Gu <z.gu@dkfz.de>

top_elements_overlap

data(golub_cola)
top_rows_overlap(golub_cola, method = "euler")
top_rows_overlap(golub_cola, method = "upset")
top_rows_overlap(golub_cola, method = "venn")
top_rows_overlap(golub_cola, method = "correspondance")