Description Usage Arguments Value Examples
Attributes size to Nodes depending on number of interaction
1 | Node_df_FreqIn(genelist, freqIn)
|
genelist |
a vector of genes |
freqIn |
dataframe with Node interaction frequencies |
A data frame with nodes size attributes
1 2 3 4 5 6 7 8 9 10 11 | Node_df_FreqIn
## Not run:
r_data <- new.env()
r_data[["FreqIn"]] <- structure(list(Genes = c("ATM", "ATR", "BRCA1", "BRCA2", "CHEK1",
"CHEK2", "FANCF", "MDC1", "RAD51"), FreqSum = c(0.04, 0.05, 0.05,
0.03, 0.05, 0.04, 0.03, 0.03, 0.02)), .Names = c("Genes", "FreqSum"),
class = "data.frame", row.names = c(NA, -9L))
GeneList <- whichGeneList("DNA_damage_Response")
node_df <- Node_df_FreqIn(GeneList, r_data$FreqIn)
## End(Not run)
|
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