LUSCexp: LUSC RNA-seq dataset

In SEPIRA: Systems EPigenomics Inference of Regulatory Activity

Description

LUSCmeth is a subset of TCGA LUSC RNA dataset. It contains 391 genes and 518 samples with 45 normal sample and 473 cancer samples.

Usage

data("LUSCexp")

Format

The format is: num [1:391, 1:518] -0.0842 0.7222 1.1949 -1.1637 0.2717 ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:391] "100009676" "100129842" "100130417" "100131726" ... ..$ : chr [1:518] "TCGA-22-5481-11" "TCGA-56-7222-11" "TCGA-77-7338-11" "TCGA-77-7138-11" ...

Source

https://cancergenome.nih.gov/

Examples

data(LUSCexp)

SEPIRA documentation built on Nov. 8, 2020, 6:33 p.m.