getSeqFromRCSBPDB: Retrieve Protein Sequence from RCSB PDB
In Rcpi: Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery

Retrieve Protein Sequence from RCSB PDB

1	getSeqFromRCSBPDB(id, parallel = 5)

`id`	A character vector, as the protein ID.
`parallel`	An integer, the parallel parameter, indicates how many process the user would like to use for retrieving the data (using RCurl), default is `5`. For regular cases, we recommend a number less than `20`.

This function retrieves protein sequences from RCSB PDB.

A list, each component contains one of the protein represented by amino acid sequence(s).

See getPDBFromRCSBPDB for retrieving protein in PDB format from the RCSB PDB database.

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id = c('4HHB', '4FF9')

getSeqFromRCSBPDB(id)

Rcpi documentation built on Nov. 8, 2020, 8:23 p.m.

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