Findings-class: Findings class

In RImmPort: RImmPort: Enabling Ready-for-analysis Immunology Research Data

Description

Findings class

Fields

lb_l

Laboratory Test Results data LB and supplemental Laboratory Test Results data SUPPLB

pe_l

Physical Examination data PE and supplemental Physical Examination data SUPPPE

vs_l

Vital Signs data VS and supplemental Vital Signs data SUPPVS

qs_l

Questionnaires data QS and supplemental Questionnaires data SUPP

fa_l

Findings About data FA and supplemental Findings About data SUPPFA

sr_l

Skin Response data SR and supplemental Skin Response data SUPP

pf_l

Genetics Findings data PF and supplemental Genetics Findings data SUPPPF

za_l

Protein Quantification data ZA and supplemental Protein Quantification data SUPPZA

zb_l

Cellular Quantification data ZB and supplemental Cellular Quantification data SUPP

zc_l

Nucleic Acid Quantification data ZC and supplemental Nucleic Acid Quantification data SUPP

zd_l

Titer Assay Results data ZD and supplemental Titer Assay Results data SUPP

Examples

library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
sdy139 <- getStudy("SDY139")
zb_df <- sdy139$findings$zb_l$zb_df

RImmPort documentation built on Nov. 8, 2020, 5:54 p.m.