dNBpsis: A score function for the psi of a given dimension
In RCM: Fit row-column association models with the negative binomial distribution for the microbiome
Description
Usage
Arguments
Value
Description
A score function for the psi of a given dimension
Usage
1
Arguments
beta
a scalar, the initial estimate
X
the n-by-p count matrix
reg
the regressor matrix, the outer product of current row
and column scores
theta
a n-by-p matrix with the dispersion parameters
muMarg
the nxp offset matrix
allowMissingness
A boolean, are missing values present
naId
The numeric index of the missing values in X
...
other arguments passed on to the jacobian
Value
The evaluation of the score function at beta, a scalar
RCM documentation built on Nov. 8, 2020, 5:22 p.m.
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Description Usage Arguments Value
Description
A score function for the psi of a given dimension
Usage
1 |
Arguments
beta |
a scalar, the initial estimate |
X |
the n-by-p count matrix |
reg |
the regressor matrix, the outer product of current row and column scores |
theta |
a n-by-p matrix with the dispersion parameters |
muMarg |
the nxp offset matrix |
allowMissingness |
A boolean, are missing values present |
naId |
The numeric index of the missing values in X |
... |
other arguments passed on to the jacobian |
Value
The evaluation of the score function at beta, a scalar
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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