updateTxdbStartSites: Update start sites of leaders
In ORFik: Open Reading Frames in Genomics
Description
Usage
Arguments
Value
Description
Update start sites of leaders
Usage
1
updateTxdbStartSites(txList, fiveUTRs, removeUnused)
Arguments
txList
a list, call of as.list(txdb)
fiveUTRs
a GRangesList of 5' leaders
removeUnused
logical (FALSE), remove leaders that did not have any
cage support. (standard is to set them to original annotation)
Value
a list, modified call of as.list(txdb)
ORFik documentation built on March 27, 2021, 6 p.m.
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Description Usage Arguments Value
Description
Update start sites of leaders
Usage
1 | updateTxdbStartSites(txList, fiveUTRs, removeUnused)
|
Arguments
txList |
a list, call of as.list(txdb) |
fiveUTRs |
a GRangesList of 5' leaders |
removeUnused |
logical (FALSE), remove leaders that did not have any cage support. (standard is to set them to original annotation) |
Value
a list, modified call of as.list(txdb)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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