NBSpliceRes-GetGeneResults: Get differentially spliced genes.

In NBSplice: Negative Binomial Models to detect Differential Splicing

Description

GetGeneResults returns the results obtained for the specified gene.

Usage

GetGeneResults(myNBRes, gene, filterLowExpIso = TRUE)

## S4 method for signature 'NBSpliceRes'
GetGeneResults(myNBRes, gene, filterLowExpIso = TRUE)

Arguments

myNBRes	NBSpliceRes class object.
gene	Character indicating the gene name.
filterLowExpIso	Logical indicating if lower-expression isoforms should be filtered out.

Value

Data.frame object with gene results.

Note

see full example in NBSpliceRes-class

Author(s)

Gabriela A. Merino [e-mail] and Elmer A. Fernandez [e-mail]

See Also

NBSpliceRes

Other NBSpliceRes: GetDSGenes, GetDSResults, NBSpliceRes-class, NBSpliceRes-initialize, NBSpliceRes, myDSResults, plotGeneResults, plotRatiosDisp, plotVolcano

Examples

data(myDSResults, package="NBSplice")

myResults<-results(myDSResults)

## Select the first gene
gene<-myResults[,"gene"][1]

myGeneResults<-GetGeneResults(myDSResults, gene)

NBSplice documentation built on Nov. 8, 2020, 8:07 p.m.