MGFR-package: Marker Gene Finder in RNA-seq data
In MGFR: Marker Gene Finder in RNA-seq data

Description Details Author(s) Examples

The package is designed to detect marker genes from RNA-seq data

Package:	MGFR
Type:	Package
Version:	1.9.2
License:	GPL-3

Khadija El Amrani Maintainer: Khadija El Amrani <khadija.el-amrani@charite.de>

data(ref.mat)
res.list <- getMarkerGenes.rnaseq(ref.mat, class.vec=colnames(ref.mat), samples2compare="all", annotate=TRUE, gene.ids.type="ensembl", score.cutoff=1)
names(res.list)
## show the first 20 markers of liver
res.list[["liver_markers"]][1:20]