getGeneAnn: Retrieve gene annotations from the NCBI, HNSC, and Uniprot...
In MAGeCKFlute: Integrative Analysis Pipeline for Pooled CRISPR Functional Genetic Screens
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Retrieve gene annotations from the NCBI, HNSC, and Uniprot databases.
Usage
1
getGeneAnn(org = "hsa", update = FALSE)
Arguments
org
Character, hsa (default), bta, cfa, mmu, ptr, rno, ssc are optional.
update
Boolean, indicating whether download current annotation.
Value
A data frame.
Author(s)
Wubing Zhang
Examples
1
2
3
4
5
## Not run:
ann = getGeneAnn("hsa")
head(ann)
## End(Not run)
MAGeCKFlute documentation built on Nov. 8, 2020, 5:40 p.m.
R Package Documentation
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Description Usage Arguments Value Author(s) Examples
Description
Retrieve gene annotations from the NCBI, HNSC, and Uniprot databases.
Usage
1 | getGeneAnn(org = "hsa", update = FALSE)
|
Arguments
org |
Character, hsa (default), bta, cfa, mmu, ptr, rno, ssc are optional. |
update |
Boolean, indicating whether download current annotation. |
Value
A data frame.
Author(s)
Wubing Zhang
Examples
1 2 3 4 5 | ## Not run:
ann = getGeneAnn("hsa")
head(ann)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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