conditions: Accessor functions for the 'conditions' information in a...
In DESeq: Differential gene expression analysis based on the negative binomial distribution
Description
Usage
Arguments
Author(s)
Examples
Description
The conditions vector is a factor that assigns to each column of the count data
a condition (or treatment, or phenotype, or the like). This information is stored
in the CountDataSet's "phenoData" slot as a row named "condition".
Usage
1
2
3
4
## S4 method for signature 'CountDataSet'
conditions(object, ...)
## S4 replacement method for signature 'CountDataSet'
conditions(object) <- value
Arguments
object
a CountDataSet
value
a vector of suitable length, i.e. with as many elements as
object has samples.
...
should not be used for this method.
Author(s)
Simon Anders, sanders@fs.tum.de
Examples
1
2
cds <- makeExampleCountDataSet()
conditions( cds )
DESeq documentation built on April 28, 2020, 6:37 p.m.
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Description Usage Arguments Author(s) Examples
Description
The conditions vector is a factor that assigns to each column of the count data a condition (or treatment, or phenotype, or the like). This information is stored in the CountDataSet's "phenoData" slot as a row named "condition".
Usage
1 2 3 4 | ## S4 method for signature 'CountDataSet'
conditions(object, ...)
## S4 replacement method for signature 'CountDataSet'
conditions(object) <- value
|
Arguments
object |
a CountDataSet |
value |
a vector of suitable length, i.e. with as many elements as
|
... |
should not be used for this method. |
Author(s)
Simon Anders, sanders@fs.tum.de
Examples
1 2 | cds <- makeExampleCountDataSet()
conditions( cds )
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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