readSequence: Convert read position into read sequence
In ChIPsim: Simulation of ChIP-seq experiments
Description
Usage
Arguments
Value
Author(s)
See Also
Description
Given a read position, a reference sequence, a strand and a read length this function returns
the read sequence.
Usage
1
readSequence(readPos, sequence, strand, readLen = 36)
Arguments
readPos
Numeric value indicating the start position on the chromosome.
sequence
Chromosome sequence (a DNAString)
strand
Strand indicator (+1 / -1)
readLen
Length of read.
Value
Read sequence.
Author(s)
Peter Humburg
See Also
ChIPsim documentation built on Nov. 8, 2020, 8:09 p.m.
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Description Usage Arguments Value Author(s) See Also
Description
Given a read position, a reference sequence, a strand and a read length this function returns the read sequence.
Usage
1 | readSequence(readPos, sequence, strand, readLen = 36)
|
Arguments
readPos |
Numeric value indicating the start position on the chromosome. |
sequence |
Chromosome sequence (a |
strand |
Strand indicator (+1 / -1) |
readLen |
Length of read. |
Value
Read sequence.
Author(s)
Peter Humburg
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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