COMPASS
Combinatorial Polyfunctionality Analysis of Single Cells

Package index
Search the COMPASS package
Vignettes
Functions
152
Source code
49
Man pages
42
Home
/
Bioconductor
/
COMPASS
/
COMPASSResult-data: Simulated COMPASS fit

COMPASSResult-data: Simulated COMPASS fit
In COMPASS: Combinatorial Polyfunctionality Analysis of Single Cells

Description Details

Description

This dataset represents the result of fitting the COMPASS model on the accompanying dataset CC, as exported by data(COMPASS). Please see the vignette (vignette("COMPASS")) for more details on how to interact with a COMPASS fit.

Details

The model is fit as follows, using the COMPASSContainer CC. 

1
2
3
4
5
CR <- COMPASS(CC,
  treatment=trt == "Treatment",
  control=trt == "Control",
  iterations=1000
)

The dataset is exported as CR, which is a short alias for COMPASSResult.

Please see COMPASS for more information on the output from a COMPASS model fit.


COMPASS documentation built on Nov. 8, 2020, 8:05 p.m.

Related to COMPASSResult-data in COMPASS...

COMPASS index
Package overview README.md SimpleCOMPASS How to use the SimpleCOMPASS Interface

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close