getQualityScore: Computes a quality score for a CNV fit

Description Usage Arguments Value Author(s)

Description

The quality scores measures how well the clusters are separated. It ocmpares the locations of the means with the standard error for each pair of adjacent cluster. A quality score greater than 4 is usually good enough for association studies.

Usage

1
getQualityScore(posterior)

Arguments

posterior

A data frame generated by CNVtest.binary

Value

One number, the quality score.

Author(s)

Vincent Plagnol vincent.plagnol@cimr.cam.ac.uk and Chris Barnes christopher.barnes@imperial.ac.uk


CNVtools documentation built on April 28, 2020, 6:06 p.m.