decorate_dend: Decorate Heatmap Dendrograms
In zhongmicai/complexHeatmap: Make Complex Heatmaps

Description Usage Arguments Details Value Author(s) See Also Examples

Decorate Heatmap Dendrograms

1 2	decorate_dend(heatmap, code, slice = 1, which = c("column", "row"), envir = new.env(parent = parent.frame()))

`heatmap`	Name of the heatmap.
`code`	Code that adds graphics in the selected heatmap dendrogram.
`slice`	Index of the row slice or column slice in the heatmap.
`which`	Is the dendrogram on rows or on columns?
`envir`	Where to look for variables inside `code`.

If you know the number of leaves in the dendrogram, it is simple to calculate the position of every leave in the dendrogram. E.g., for the column dendrogram, the i^th leave is located at:

1 2	# assume nc is the number of columns in the column slice unit((i-0.5)/nc, "npc")

This function returns no value.

Zuguang Gu <z.gu@dkfz.de>

https://jokergoo.github.io/ComplexHeatmap-reference/book/heatmap-decoration.html

set.seed(123)
Heatmap(matrix(rnorm(100), 10), name = "mat", km = 2)
decorate_dend("mat", {
    grid.rect(gp = gpar(fill = "#FF000080"))
}, which = "row", slice = 2)