Man pages for zhengxwen/gdsfmt
R Interface to CoreArray Genomic Data Structure (GDS) Files
| addfile.gdsn | Add a GDS node with a file |
| addfolder.gdsn | Add a folder to the GDS node |
| add.gdsn | Add a new GDS node |
| append.gdsn | Append data to a specified variable |
| apply.gdsn | Apply functions over margins |
| assign.gdsn | Assign/append data to a GDS node |
| cache.gdsn | Caching variable data |
| cleanup.gds | Clean up fragments |
| closefn.gds | Close a GDS file |
| clusterApply.gdsn | Apply functions over matrix margins in parallel |
| cnt.gdsn | Return the number of child nodes |
| compression.gdsn | Modify compression mode |
| copyto.gdsn | Copy GDS nodes |
| createfn.gds | Create a GDS file |
| delete.attr.gdsn | Delete attribute(s) |
| delete.gdsn | Delete a GDS node |
| diagnosis.gds | Diagnose the GDS file |
| digest.gdsn | create hash function digests |
| exist.gdsn | Return whether the path exists or not |
| gds.class | the class of GDS file |
| gdsfmt-package | R Interface to CoreArray Genomic Data Structure (GDS) files |
| gdsn.class | the class of variable node in the GDS file |
| get.attr.gdsn | Get attributes |
| getfile.gdsn | Output a file from a stream container |
| getfolder.gdsn | Get the folder |
| index.gdsn | Get the specified node |
| is.element.gdsn | whether the elements are in a set |
| is.sparse.gdsn | whether a sparse array or not |
| lasterr.gds | Return the last error message |
| ls.gdsn | Return the names of child nodes |
| moveto.gdsn | Relocate a GDS node |
| name.gdsn | Return the variable name of a node |
| objdesp.gdsn | Variable description |
| openfn.gds | Open a GDS file |
| permdim.gdsn | Array Transposition |
| print.gds.class | Show the information of class "gds.class" and "gdsn.class" |
| put.attr.gdsn | Add an attribute into a GDS node |
| readex.gdsn | Read data field of a GDS node with a selection |
| read.gdsn | Read data field of a GDS node |
| readmode.gdsn | Switch to read mode in the compression settings |
| rename.gdsn | Rename a GDS node |
| setdim.gdsn | Set the dimension of data field |
| showfile.gds | Enumerate opened GDS files |
| summarize.gdsn | GDS object Summaries |
| sync.gds | Synchronize a GDS file |
| system.gds | Get the parameters in the GDS system |
| unload.gdsn | Unload a GDS node |
| write.gdsn | Write data to a GDS node |
