Files in wgmao/PLIER
Pathway-Level Information Extractor (PLIER): a generative model for gene expression data
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
R/Allfuncs.R
R/funcs.R
README.md
data/CTNNB1mut.rda
data/HCCdata.rda
data/SPVs.rda
data/bloodCellMarkersIRISDMAP.rda
data/canonicalPathways.rda
data/cellsUsoskin.rda
data/chemgenPathways.rda
data/dataUsoskin.rda
data/dataWholeBlood.rda
data/human2Mouse.rda
data/immunePathways.rda
data/majorCellTypes.rda
data/oncogenicPathways.rda
data/plierResult.rda
data/svmMarkers.rda
data/usoskinRes.rda
data/vacData.rda
data/xCell.rda
inst/doc/.Rhistory
inst/doc/missfont.log
inst/doc/vignette.R
inst/doc/vignette.Rnw
inst/doc/vignette.log
inst/doc/vignette.synctex.gz
knitrDoc.Rnw
man/.Rhistory
man/CTNNB1mut.Rd
man/DataSmooth.Rd
man/HCCData.Rd
man/ListPriors.Rd
man/PLIER.Rd
man/PLIERsparse.Rd
man/SPVs.Rd
man/VarianceExplained.Rd
man/bloodCellMarkersIRISDMAP.Rd
man/canonicalPathways.Rd
man/chemgenPathways.Rd
man/combinePaths.Rd
man/commonRows.Rd
man/computeChat.Rd
man/getCutoff.Rd
man/immunePathways.Rd
man/mapPathway.Rd
man/nameB.Rd
man/num.pc.Rd
man/oncogenicPathways.Rd
man/plierResToMarkers.Rd
man/plotMat.Rd
man/plotTopZ.Rd
man/plotTopZallPath.Rd
man/plotU.Rd
man/projectPLIER.Rd
man/rotateSVD.Rd
man/rowNorm.Rd
man/simpleDecomp.Rd
man/svmMarkers.Rd
man/vacData.Rd
man/xCell.Rd
vignette.html
vignettes/vignette.Rnw
vignettes/vignette.pdf
