cor.matrix.NECorr: cor.matrix.NECorr

In warelab/NECorr: Gene Regulatory Network Correlations

cor.matrix.NECorr

Description

cor.matrix.NECorr

Usage

cor.matrix.NECorr(
  GEMatrix,
  cpus = cpus,
  cormethod = c("GCC", "PCC", "SCC", "KCC"),
  style = c("pairs.between", "pairs.only"),
  var1.id = NA,
  var2.id = NA,
  pernum = 0,
  sigmethod = c("two.sided", "one.sided"),
  output = c("matrix", "paired")
)

Arguments

GEMatrix	expression matrix
cpus	number of cpu used
cormethod	correlation method:"GCC", "PCC", "SCC", "KCC"
style	type of pairs: "pairs.between","pairs.only"
var1.id	variable vector source
var2.id	varaible vector target
pernum	permutation number
sigmethod	significance
output	matrix or paired

Value

resList

warelab/NECorr documentation built on June 25, 2024, 7:25 a.m.