Files in waldronlab/curatedTCGAData

Curated Data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects

NEWS.md R/curatedTCGAData-package.R R/curatedTCGAData.R R/utils.R README.md data-raw/diseaseCodes.R inst/scripts/bits2rd.R inst/scripts/docsMeta.R inst/scripts/make-data.R inst/scripts/make-documentation.R inst/scripts/make-metadata.R inst/scripts/make-upload.R inst/scripts/tools.R man/ACC-v2.0.1.Rd man/ACC-v2.1.0.Rd man/ACC.Rd man/BLCA-v2.0.1.Rd man/BLCA-v2.1.0.Rd man/BLCA.Rd man/BRCA-v2.0.1.Rd man/BRCA-v2.1.0.Rd man/BRCA.Rd man/CESC-v2.0.1.Rd man/CESC-v2.1.0.Rd man/CESC.Rd man/CHOL-v2.0.1.Rd man/CHOL-v2.1.0.Rd man/CHOL.Rd man/COAD-v2.0.1.Rd man/COAD-v2.1.0.Rd man/COAD.Rd man/DLBC-v2.0.1.Rd man/DLBC-v2.1.0.Rd man/DLBC.Rd man/ESCA-v2.0.1.Rd man/ESCA-v2.1.0.Rd man/ESCA.Rd man/GBM-v2.0.1.Rd man/GBM-v2.1.0.Rd man/GBM.Rd man/HNSC-v2.0.1.Rd man/HNSC-v2.1.0.Rd man/HNSC.Rd man/KICH-v2.0.1.Rd man/KICH-v2.1.0.Rd man/KICH.Rd man/KIRC-v2.0.1.Rd man/KIRC-v2.1.0.Rd man/KIRC.Rd man/KIRP-v2.0.1.Rd man/KIRP-v2.1.0.Rd man/KIRP.Rd man/LAML-v2.0.1.Rd man/LAML-v2.1.0.Rd man/LAML.Rd man/LGG-v2.0.1.Rd man/LGG-v2.1.0.Rd man/LGG.Rd man/LIHC-v2.0.1.Rd man/LIHC-v2.1.0.Rd man/LIHC.Rd man/LUAD-v2.0.1.Rd man/LUAD-v2.1.0.Rd man/LUAD.Rd man/LUSC-v2.0.1.Rd man/LUSC-v2.1.0.Rd man/LUSC.Rd man/MESO-v2.0.1.Rd man/MESO-v2.1.0.Rd man/MESO.Rd man/OV-v2.0.1.Rd man/OV-v2.1.0.Rd man/OV-v2.1.1.Rd man/OV.Rd man/PAAD-v2.0.1.Rd man/PAAD-v2.1.0.Rd man/PAAD.Rd man/PCPG-v2.0.1.Rd man/PCPG-v2.1.0.Rd man/PCPG.Rd man/PRAD-v2.0.1.Rd man/PRAD-v2.1.0.Rd man/PRAD.Rd man/READ-v2.0.1.Rd man/READ-v2.1.0.Rd man/READ.Rd man/SARC-v2.0.1.Rd man/SARC-v2.1.0.Rd man/SARC.Rd man/SKCM-v2.0.1.Rd man/SKCM-v2.1.0.Rd man/SKCM-v2.1.1.Rd man/SKCM.Rd man/STAD-v2.0.1.Rd man/STAD-v2.1.0.Rd man/STAD.Rd man/TGCT-v2.0.1.Rd man/TGCT-v2.1.0.Rd man/TGCT.Rd man/THCA-v2.0.1.Rd man/THCA-v2.1.0.Rd man/THCA.Rd man/THYM-v2.0.1.Rd man/THYM-v2.1.0.Rd man/THYM.Rd man/UCEC-v2.0.1.Rd man/UCEC-v2.1.0.Rd man/UCEC.Rd man/UCS-v2.0.1.Rd man/UCS-v2.1.0.Rd man/UCS.Rd man/UVM-v2.0.1.Rd man/UVM-v2.1.0.Rd man/UVM.Rd man/curatedTCGAData-package.Rd man/curatedTCGAData.Rd tests/testthat.R tests/testthat/test-curatedTCGAData.R tests/testthat/test-resources.R vignettes/curatedTCGAData.Rmd