mergeColData: Take a MultiAssayExperiment and include curated variables
In waldronlab/BiocInterfaces: TCGA utility functions for data management
View source: R/simplifyColData.R
mergeColData R Documentation
Take a MultiAssayExperiment and include curated variables
Description
This function works on the colData of a
MultiAssayExperiment
object to merge curated variable columns or other clinical variables that
would like to be added. It is recommended that the user run the scripts in
the MultiAssayExperiment.TCGA repository that build the "enhanced" type of
data but not necessary if using different clinical data. Please see the
repository's README for more information.
Usage
mergeColData(MultiAssayExperiment, colData)
Arguments
MultiAssayExperiment
A
MultiAssayExperiment
object
colData
A DataFrame or data.frame to merge with
clinical data in the MultiAssayExperiment object
Value
A
MultiAssayExperiment
object
Examples
library(MultiAssayExperiment)
mergeColData(MultiAssayExperiment(), S4Vectors::DataFrame())
waldronlab/BiocInterfaces documentation built on Nov. 4, 2024, 7:48 a.m.
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View source: R/simplifyColData.R
| mergeColData | R Documentation |
Take a MultiAssayExperiment and include curated variables
Description
This function works on the colData of a
MultiAssayExperiment
object to merge curated variable columns or other clinical variables that
would like to be added. It is recommended that the user run the scripts in
the MultiAssayExperiment.TCGA repository that build the "enhanced" type of
data but not necessary if using different clinical data. Please see the
repository's README for more information.
Usage
mergeColData(MultiAssayExperiment, colData)
Arguments
MultiAssayExperiment |
A
|
colData |
A |
Value
A
MultiAssayExperiment
object
Examples
library(MultiAssayExperiment)
mergeColData(MultiAssayExperiment(), S4Vectors::DataFrame())
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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