vsbuffalo/qrqc: Quick Read Quality Control
Quickly scans reads and gathers statistics on base and quality frequencies, read length, k-mers by position, and frequent sequences. Produces graphical output of statistics for use in quality control pipelines, and an optional HTML quality report. S4 SequenceSummary objects allow specific tests and functionality to be written around the data collected.
Getting started
Browse package contents
Package details |
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| Author | Vince Buffalo |
| Bioconductor views | DataImport Preprocessing QualityControl Sequencing Visualization |
| Maintainer | Vince Buffalo <vsbuffalo@ucdavis.edu> |
| License | GPL (>=2) |
| Version | 1.37.1 |
| URL | http://github.com/vsbuffalo/qrqc |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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