inst/tinytest/test-datasummary_crosstab.R

In vincentarelbundock/gtsummary: Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready

# errors

# + not allowed on the left side
expect_error(datasummary_crosstab(var1 + var2 ~ var3, data = mtcars))

# + not allowed on the right side
expect_error(datasummary_crosstab(var1 ~ var2 + var3, data = mtcars))

# formula needs to be two-sided
expect_error(datasummary_crosstab(~var3, data = mtcars))

# left-hand side of `statistic` must either be empty of 1
expect_error(datasummary_crosstab(var1 ~ var2, statistic = N ~ N, data = mtcars))

# right-hand side of `statistic` may only contain allowed valued
expect_error(datasummary_crosstab(var1 ~ var2, statistic = ~ Mean + N + Percent(), data = mtcars))

# `statistic` may not contain interactions
expect_error(datasummary_crosstab(var1 ~ var2, statistic = ~ N * Percent(), data = mtcars))

statistic = NULL
tmp <- datasummary_crosstab(cyl * am ~ gear,
  statistic = NULL,
  data = mtcars,
  output = "dataframe")
expect_equivalent(dim(tmp), c(6, 5))


# basic functionality
# just one statistic, no totals
tab1 <- datasummary_crosstab(cyl ~ gear, statistic = ~N, data = mtcars, output = "dataframe")
expect_equivalent(dim(tab1), c(3, 5))
expect_equivalent(tab1[, 2], rep("N", 3))

# just one statistic and row totals
tab2 <- datasummary_crosstab(cyl ~ gear, statistic = ~ 1 + N, data = mtcars, output = "dataframe")
expect_equivalent(dim(tab2), c(3, 6))
expect_equivalent(utils::tail(names(tab2), 1), "All")

# just one statistic and row totals and col totals
tab3 <- datasummary_crosstab(cyl ~ gear, statistic = 1 ~ 1 + N, data = mtcars, output = "dataframe")
expect_equivalent(dim(tab3), c(4, 6))
expect_equivalent(utils::tail(names(tab3), 1), "All")
expect_equivalent(utils::tail(tab3[, 1], 1), "All")

# another statistic, fmt argument
tab4 <- datasummary_crosstab(cyl ~ gear, statistic = 1 ~ 1 + Percent(), data = mtcars, output = "dataframe", fmt = 2)
expect_equivalent(dim(tab4), c(4, 6))
expect_equivalent(utils::tail(names(tab4), 1), "All")
expect_equivalent(utils::tail(tab4[, 1], 1), "All")
expect_equivalent(tab4[4, 6], "100.00")

# default statistic
tab5 <- datasummary_crosstab(cyl ~ gear, data = mtcars, output = "dataframe")
expect_equivalent(dim(tab5), c(8, 6))
expect_equivalent(tab5[, 2], rep(c("N", "% row"), 4))

# switch order
tab6 <- datasummary_crosstab(cyl ~ gear,
  statistic = 1 ~ 1 + Percent("row") + N,
  data = mtcars, output = "dataframe")
expect_equivalent(dim(tab6), c(8, 6))
expect_equivalent(tab6[, 2], rep(c("% row", "N"), 4))

# all stats
tab7 <- datasummary_crosstab(cyl ~ gear,
  statistic = 1 ~ 1 + N + Percent() + Percent("col") + Percent("row"),
  data = mtcars, output = "dataframe")
expect_equivalent(dim(tab7), c(16, 6))
expect_equivalent(tab7[, 2], rep(c("N", "%", "% col", "% row"), 4))

# all stats - single quotes
tab8 <- datasummary_crosstab(cyl ~ gear, statistic = 1 ~ 1 + N + Percent() + Percent("col") + Percent("row"), data = mtcars, output = "dataframe")
expect_equivalent(dim(tab8), c(16, 6))
expect_equivalent(tab8[, 2], rep(c("N", "%", "% col", "% row"), 4))


# interactions
# left-hand side interaction
tab1 <- datasummary_crosstab(am * cyl ~ gear, statistic = 1 ~ 1 + N + Percent(), data = mtcars, output = "dataframe")
expect_equivalent(dim(tab1), c(14, 7))

# right-hand side interaction
tab2 <- datasummary_crosstab(cyl ~ am * gear, statistic = 1 ~ 1 + N + Percent(), data = mtcars, output = "dataframe")
expect_equivalent(dim(tab2), c(8, 9))

# both side interaction
tab3 <- datasummary_crosstab(vs * cyl ~ am * gear, statistic = 1 ~ 1 + N + Percent(), data = mtcars, output = "dataframe")
expect_equivalent(dim(tab3), c(14, 10))


# issue #455: variable rename
dat <- mtcars
dat$`# of Cylinders` <- dat$cyl
tab <- datasummary_crosstab(`# of Cylinders` ~ am * gear, data = dat)
expect_inherits(tab, "tinytable")
expect_error(datasummary_crosstab((`# of Cylinders` = cyl) ~ am * gear, data = dat))
expect_error(datasummary_crosstab(Heading("# of Cylinders") * cyl ~ am * gear, data = dat))