extractLOBdbasedata | R Documentation |
Extracts data from a LOBSTAHS LOBdbase-class
object for a given
molecular species.
extractLOBdbasedata(frag_ID, database)
frag_ID |
The LOBdbase fragment ID(s) corresponding to the species for which data should be extracted. |
database |
The |
A data frame containing the extracted data, with field names corresponding to
the slots in database
.
James Collins, james.r.collins@aya.yale.edu
Collins, J.R., B.R. Edwards, H.F. Fredricks, and B.A.S. Van Mooy. 2016. LOBSTAHS: An adduct-based lipidomics strategy for discovery and identification of oxidative stress biomarkers. Analytical Chemistry 88:7154-7162
LOBdbase
,
LOBdbase
loadLOBdbase
,
generateLOBdbase
,
default.LOBdbase
## extract data from the default database for the [M+H]+ adduct of ## dinitrophenyl-phosphatidylethanolamine (DNPPE), a synthetic lipid used as an ## internal standard data(default.LOBdbase) DNPPE.data = extractLOBdbasedata(frag_ID = 19801, database = default.LOBdbase$positive)
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