ParseMarkers: Parse markers contained in a Sconify-directed marker file
In tjburns08/Sconify: A toolkit for performing KNN-based statistics for flow and mass cytometry data
Description
Usage
Arguments
Value
Examples
Description
This occurs after the user has modified the markers.csv file
to determine which markers are to be used as input for KNN and which markers
are to be used for within-knn comparisons
Usage
1
ParseMarkers(marker.file)
Arguments
marker.file
modified markers.csv file, now containing two columns.
the left column containing KNN input markers, and the right column
containing KNN comparison markers
Value
a list of 2 vectors of strings. The first element, labeled "input"
is a vector KNN input markers. THe second slemenet, labeled "functional"
are the markers to be used in the KNN based comparisons
Examples
1
2
file <- system.file("extdata", "markers.csv", package = "Sconify")
ParseMarkers(file)
tjburns08/Sconify documentation built on May 31, 2019, 8:56 a.m.
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Description Usage Arguments Value Examples
Description
This occurs after the user has modified the markers.csv file to determine which markers are to be used as input for KNN and which markers are to be used for within-knn comparisons
Usage
1 | ParseMarkers(marker.file)
|
Arguments
marker.file |
modified markers.csv file, now containing two columns. the left column containing KNN input markers, and the right column containing KNN comparison markers |
Value
a list of 2 vectors of strings. The first element, labeled "input" is a vector KNN input markers. THe second slemenet, labeled "functional" are the markers to be used in the KNN based comparisons
Examples
1 2 | file <- system.file("extdata", "markers.csv", package = "Sconify")
ParseMarkers(file)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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