plotHist: Plot histogram

In svenbioinf/OGRE: Calculate, visualize and analyse overlap between genomic regions

Plot histogram

Description

Plots overlap histograms of all subject datasets and stores them as a list, that can be accessed by metadata(myOGRE)$hist

Usage

plotHist(OGREDataSet, plot0 = FALSE)

Arguments

OGREDataSet	An OGREDataSet
plot0	plot0=FALSE(default) plots a histogram of all dataset elements with overlaps, excluding elements without overlaps. plot0=FALSE also includes elements without overlaps.

Value

OGREDataSet.

Examples

myOGRE <- makeExampleOGREDataSet()
myOGRE <- loadAnnotations(myOGRE)
myOGRE <- fOverlaps(myOGRE)
myOGRE <- plotHist(myOGRE)
metadata(myOGRE)$hist

svenbioinf/OGRE documentation built on Jan. 30, 2023, 10:55 p.m.