Man pages for stela2502/Rscexv
The backend for the SCExV (single cell expression view) server.
| analyse.data-methods | description of function analyse.data |
| analyzed | This is the analyzed data used for downstream testing |
| bestGrouping | description of function randomForest |
| boot_p_value-methods | description of function boot_p_value |
| calc.lin.lang.4_list-methods | description of function calc.lin.lang.4_list |
| check.dataObj-methods | description of function check.dataObj |
| checkGrouping-methods | description of function checkGrouping |
| clusters-methods | description of function clusters |
| coexpressGenes-methods | description of function coexpressGenes |
| coexpressionMatrix-methods | description of function coexpressionMatrix |
| col4bean-methods | description of function col4bean |
| colors_4-methods | description of function createRFgrouping_col |
| complexHeatmap-methods | description of function plot.beans |
| createDataObj-methods | description of function createDataObj |
| create_p_values-methods | description of function create_p_values |
| createRFgrouping_samples-methods | description of function createRFgrouping_samples |
| difference-methods | description of function difference |
| exportGroups-methods | description of function analyse.data |
| FACS.heatmap-methods | description of function FACS.heatmap |
| filter.on.controls.no.inv-methods | description of function filter.on.controls.no.inv |
| force.unique.sample-methods | description of function force.unique.sample |
| group_1D-methods | description of function group_1D |
| group_1D_worker-methods | description of function group_1D_worker |
| group_on_strings-methods | description of function group_on_strings |
| identifyBestGrouping-methods | description of function identifyBestGrouping |
| implyCloseOrder-methods | description of function implyCloseOrder |
| InbuiltData | This is the test dataset also available at the SCExV server... |
| kick.expressed.negContr.samples-methods | description of function kick.expressed.negContr.samples |
| locked-methods | description of function locked |
| match.sample.names-methods | description of function match.sample.names |
| mds.and.clus-methods | description of function mds.and.clus |
| mergeComplexSampleGroupings-methods | description of function mergeSampleGroupings |
| mergeSampleGroupings-methods | description of function mergeSampleGroupings |
| norm.PCR-methods | description of function norm.PCR |
| PCR.heatmap-methods | description of function PCR.heatmap |
| p.lin.lang-methods | description of function p.lin.lang |
| plot.beans-methods | description of function plot.beans |
| plotcoma-methods | description of function plotcoma |
| plotDensity-methods | description of function analyse.data |
| plot.histograms-methods | description of function plot.histograms |
| plot.legend-methods | description of function plot.legend |
| plot.violines-methods | description of function plot.violines |
| plug.999-methods | description of function plug.999 |
| predict.rf | description of function predict.rf |
| pwd-methods | description of function pwd |
| quality_of_fit-methods | description of function quality_of_fit |
| qualityTest-methods | description of function qualityTest |
| read.FACS-methods | description of function read.FACS |
| read.FACS.set-methods | description of function read.FACS.set |
| read.PCR.heatmap-methods | description of function read.PCR.heatmap |
| read.PCR-methods | description of function read.PCR |
| read.PCR.set-methods | description of function read.PCR.set |
| regroup-methods | description of function regroup |
| release.lock-methods | description of function release_lock |
| remove.FACS.genes-methods | description of function remove.FACS.genes |
| remove.genes-methods | description of function remove.genes |
| remove.samples-methods | description of function remove.samples |
| reorder.genes-methods | description of function remove.genes |
| reorder.samples-methods | description of function remove.genes |
| rfCluster | rfCluster |
| Rscexv | Rscexv |
| Rscexv-methods | description of function createDataObj |
| saveObj-methods | description of function analyse.data |
| scale.FACS.data-methods | description of function scale.FACS.data |
| sd.filter-methods | description of function sd.filter |
| set.lock-methods | description of function set_lock |
| show-methods | description of function show |
| SingleCellAssay_Pvalues-methods | description of function SingleCellAssay_Pvalues |
| this.color-methods | description of function createRFgrouping_col |
| vioplot-methods | description of function vioplot |
| write.stats-methods | description of function write.stats |
| z.score.PCR.mad-methods | description of function z.score.PCR.mad |
