Files in samWieczorek/Magellan
A Pipeline Manager

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.github/workflows/check-bioc.yml

DESCRIPTION

Dockerfile

Magellan.Rproj

Meta/vignette.rds

NAMESPACE

NEWS.md R/AllGenerics.R R/app_config.R R/app_server.R R/app_ui.R R/build_nav_ui.R R/check_funcs.R R/code_used_by_external_modules.R R/config_class.R R/createModuleTemplate.R R/doc-data.R R/general_nav_funcs.R R/global.R R/load_save.R R/mod_Debug_Infos.R R/mod_Load_Dataset.R R/mod_bsmodal.R R/mod_dl.R R/mod_format_DT.R R/mod_nav.R R/mod_popover_for_help.R R/mod_timeline_h.R R/mod_timeline_v.R R/pipeline_funcs.R R/process_funcs.R R/run_app.R R/run_workflow.R R/utils.R README.md

_pkgdown.yml

data/feat1.rda

dev/01_start.R dev/02_dev.R dev/03_deploy.R dev/run_dev.R

dev/test_dev/H_timeline.css

dev/test_dev/app_V_timeline.R dev/test_dev/dash_2.R dev/test_dev/dash_Magellan_example.R dev/test_dev/dash_example.R dev/test_dev/example_mod_Pipeline.R dev/test_dev/example_mod_Process.R dev/test_dev/md/Pipeline.md dev/test_dev/md/PipelineA_Description.md dev/test_dev/md/PipelineA_ProcessA.md dev/test_dev/md/PipelineA_ProcessB.md dev/test_dev/md/PipelineA_ProcessC.md dev/test_dev/md/ProcessB.md dev/test_dev/md/ProcessC.md dev/test_dev/md/ProcessDescription.md

dev/test_dev/specs.html

dev/test_dev/timeline2.sass

dev/test_dev/www/h_timeline.sass.old

dev/test_dev/www/style_tl6.css

dev/test_dev/www/v_timeline.sass.old

doc/Magellan.R doc/Magellan.Rmd

docker-compose.yml

docs/404.html

docs/articles/Build-a-pipeline-module.html

docs/articles/Build-a-pipeline-module_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Build-a-pipeline-module_files/header-attrs-2.6/header-attrs.js

docs/articles/Create-a-new-pipeline-tutorial.html

docs/articles/Create-a-new-pipeline-tutorial_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Create-a-new-pipeline-tutorial_files/header-attrs-2.6/header-attrs.js

docs/articles/CreateComplexWorkflow.html

docs/articles/CreateComplexWorkflow_files/header-attrs-2.11/header-attrs.js

docs/articles/CreatePipeline.html

docs/articles/CreatePipeline_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/CreatePipeline_files/anchor-sections-1.0/anchor-sections.css

docs/articles/CreatePipeline_files/anchor-sections-1.0/anchor-sections.js

docs/articles/CreatePipeline_files/header-attrs-2.11/header-attrs.js

docs/articles/CreateProcess.html

docs/articles/CreateProcess_files/header-attrs-2.11/header-attrs.js

docs/articles/CreateSimpleWorkflow.html

docs/articles/CreateSimpleWorkflow_files/header-attrs-2.11/header-attrs.js

docs/articles/GetStarted.html

docs/articles/GetStarted_files/header-attrs-2.11/header-attrs.js

docs/articles/Magellan.html

docs/articles/Magellan_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Magellan_files/anchor-sections-1.0/anchor-sections.css

docs/articles/Magellan_files/anchor-sections-1.0/anchor-sections.js

docs/articles/Magellan_files/header-attrs-2.11/header-attrs.js

docs/articles/Magellan_files/header-attrs-2.6/header-attrs.js

docs/articles/Prostar_workflow_tutorial.html

docs/articles/Prostar_workflow_tutorial_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Prostar_workflow_tutorial_files/header-attrs-2.6/header-attrs.js

docs/articles/Prostar_workflow_userguide.html

docs/articles/Prostar_workflow_userguide_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Prostar_workflow_userguide_files/header-attrs-2.6/header-attrs.js

docs/articles/figs/example1.png

docs/articles/figs/globalArch.png

docs/articles/figs/hierarchical_structure.png

docs/articles/figs/pipeline_structure.png

docs/articles/figs/process_navigation_ui.png

docs/articles/figs/process_overview.png

docs/articles/figs/process_structure.png

docs/articles/index.html

docs/articles/useMagellanForDevs.html

docs/articles/useMagellanForDevs_files/header-attrs-2.11/header-attrs.js

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/AddItemToDataset.html

docs/reference/AllGenerics.html

docs/reference/CheckConfig.html

docs/reference/CheckProcessCode.html

docs/reference/CleanSourceCode.html

docs/reference/Code_ObserveEvent_ValidationBtns.html

docs/reference/Generate_RenderUI_Code_For_Single_Widgets.html

docs/reference/Generate_code_for_ValidationBtns_renderUI.html

docs/reference/GetCode_ResetChildren.html

docs/reference/GetConfigCode.html

docs/reference/Get_Code_Declare_widgetsDefaultValues.html

docs/reference/Get_Code_for_ObserveEvent_widgets.html

docs/reference/Get_Code_for_dataOut.html

docs/reference/Get_Code_for_observeEven_stepsEnabled.html

docs/reference/Get_Code_for_observeEvent_remoteReset.html

docs/reference/Get_Code_for_rv_reactiveValues.html

docs/reference/Keep_Items_from_Dataset.html

docs/reference/ModuleCoreCode.html

docs/reference/Module_Return_Func.html

docs/reference/Pipeline.html

docs/reference/PrevNextBtnClass.html

docs/reference/Process.html

docs/reference/Rplot001.png

docs/reference/ScreenManager.html

docs/reference/Timestamp.html

docs/reference/btn_style.html

docs/reference/btn_success_color.html

docs/reference/createProcessTemplateForExpert.html

docs/reference/dataset-processing.html

docs/reference/default_pos.html

docs/reference/example_module_pipeline.html

docs/reference/example_module_process1.html

docs/reference/example_module_process2.html

docs/reference/example_module_process3.html

docs/reference/example_module_process_step0.html

docs/reference/feat1.html

docs/reference/global.html

docs/reference/index.html

docs/reference/mod_PipelineA.html

docs/reference/mod_PipelineA_Description.html

docs/reference/mod_PipelineA_ProcessA.html

docs/reference/mod_PipelineA_ProcessB.html

docs/reference/mod_PipelineA_ProcessC.html

docs/reference/mod_bsmodal.html

docs/reference/mod_bsmodal_server.html

docs/reference/mod_format_DT.html

docs/reference/mod_nav_pipeline_server.html

docs/reference/mod_navigation.html

docs/reference/mod_pipeline.html

docs/reference/mod_pipeline_process.R

docs/reference/mod_popover_for_help.html

docs/reference/mod_process.html

docs/reference/mod_timeline_h.html

docs/reference/mod_timeline_v.html

docs/reference/optionsBtnClass.html

docs/reference/redBtnClass.html

docs/reference/run_app.html

feat1.rds

inst/app/md/PipelineA_Description.md inst/app/md/Process1.md inst/app/md/Process2.md inst/app/md/Process3.md

inst/app/www/css/style_tl6.css

inst/app/www/favicon.ico

inst/app/www/sass/h_timeline.sass

inst/app/www/sass/test.sass

inst/app/www/sass/v_timeline.sass

inst/app/www/sass/v_timeline_Enora.sass

inst/extdata/feat1.rda

inst/golem-config.yml

inst/module_examples/md/PipelineA.md inst/module_examples/md/Process1.md inst/module_examples/md/Process2.md inst/module_examples/md/Process3.md inst/module_examples/mod_PipelineA.R inst/module_examples/mod_PipelineA_Description.R inst/module_examples/mod_Process1.R inst/module_examples/mod_Process2.R inst/module_examples/mod_Process3.R inst/module_examples/mod_foo.R inst/scripts/min_simple_workflow_app.R inst/scripts/min_simple_workflow_app_example.R inst/scripts/test_data.R man/ActionOn_Child_Changed.Rd man/AllGenerics.Rd man/All_Skipped_tag.Rd man/Build_EncapsulateScreens_ui.Rd man/Build_SkippedInfoPanel.Rd man/Build_nav_h_ui.Rd man/Build_nav_v_ui.Rd man/CheckProcessCode.Rd man/CleanSourceCode.Rd man/Discover_Skipped_Steps.Rd man/FindClosingParenthesis.Rd man/Found_Mod_Funcs.Rd man/GetConfig.Rd man/GetFirstMandatoryNotValidated.Rd man/GetMaxValidated_AllSteps.Rd man/GetMaxValidated_BeforePos.Rd man/GetStringStatus.Rd man/GetValuesFromChildren.Rd man/Get_AdditionalModule_Core_Code.Rd man/Get_Code_Declare_rv_custom.Rd man/Get_Code_Declare_widgets.Rd man/Get_Code_Update_Config_Variable.Rd man/Get_Code_for_General_observeEvents.Rd man/Get_Code_for_ObserveEvent_widgets.Rd man/Get_Code_for_dataOut.Rd man/Get_Code_for_rv_reactiveValues.Rd man/Get_Worflow_Core_Code.Rd man/Module_Return_Func.Rd man/NavPage.Rd man/PrepareData2Send.Rd man/PrevNextBtnClass.Rd man/ResetChildren.Rd man/Save_Object.Rd man/Timestamp.Rd man/ToggleState_NavBtns.Rd man/ToggleState_ResetBtn.Rd man/ToggleState_Screens.Rd man/Update_Data2send_Vector.Rd man/Update_State_Screens.Rd man/Upload_Object.Rd man/actionBtnClass.Rd man/btn_style.Rd man/btn_success_color.Rd man/config.Rd man/createModuleTemplate.Rd man/dataModal.Rd man/dataset-processing.Rd man/default_pos.Rd man/example_mod_pipeline.Rd man/feat1.Rd man/global.Rd man/insertCode.Rd man/load_examples.Rd man/mod-dl.Rd man/mod_Debug_Infos.Rd man/mod_Load_Dataset.Rd man/mod_bsmodal.Rd man/mod_format_DT.Rd man/mod_nav.Rd man/mod_popover_for_help.Rd man/mod_timeline_h.Rd man/mod_timeline_v.Rd man/optionsBtnClass.Rd man/redBtnClass.Rd man/run_app.Rd man/toggleWidget.Rd

mod_Agregation.R

mod_PipelineA.R

mod_Process1.R

mod_pipeline_process.R

mod_test.R

toto.RData

toto.rds

vignettes/.gitignore

vignettes/CreateComplexWorkflow.Rmd vignettes/CreateSimpleWorkflow.Rmd vignettes/Magellan.Rmd

vignettes/figs/basicWF.png

vignettes/figs/bullet_empty_grey_disabled.png

vignettes/figs/bullet_empty_red_disabled.png

vignettes/figs/bullet_empty_red_enabled.png

vignettes/figs/bullet_full_green_disabled.png

vignettes/figs/example1.png

vignettes/figs/globalArch.png

vignettes/figs/hierarchical_structure.png

vignettes/figs/icon_mandatory_undone.png

vignettes/figs/icon_not_mandatory_undone.png

vignettes/figs/icon_skipped.png

vignettes/figs/icon_validated.png

vignettes/figs/mandatory_undone_disabled.png

vignettes/figs/mandatory_undone_enabled.png

vignettes/figs/pipeline_layout.png

vignettes/figs/pipeline_overview.png

vignettes/figs/pipeline_structure.png

vignettes/figs/process_layout.png

vignettes/figs/process_navigation_ui.png

vignettes/figs/process_overview.png

vignettes/figs/process_structure.png

vignettes/figs/skipped_enabled.png

vignettes/figs/timeline_legend.png

vignettes/figs/tl_2.png

vignettes/figs/tl_3.png

vignettes/figs/tl_4.png

vignettes/figs/tl_start.png

vignettes/figs/undone_disabled.png

vignettes/figs/undone_enabled.png

vignettes/figs/validated_enabled.png

vignettes/useMagellanForDevs.Rmd

samWieczorek/Magellan documentation built on March 30, 2022, 3:40 a.m.

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samWieczorek/Magellan
A Pipeline Manager

Files in samWieczorek/Magellan
A Pipeline Manager

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samWieczorek/Magellan A Pipeline Manager

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samWieczorek/Magellan
A Pipeline Manager

Files in samWieczorek/Magellan
A Pipeline Manager