plotInteractive: Interactive plotting function for groups of GO terms
In sam-bassett/CompGO: An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation
Description
Given a list of functional annotation charts and optionally an
output directory, this function can output dendrograms, PCA analysis plots and a
correlation matrix to make large-scale comparisons easy.
Usage
1
plotInteractive(input, outDir = NULL, prefix = NULL, pdf = TRUE)
Arguments
input
A list of functional annotation charts.
outDir
The directory to save plots to.
prefix
The prefix to append to each file, if any.
pdf
If true, plots will be pdfs. If false, pngs.
sam-bassett/CompGO documentation built on May 29, 2019, 1:01 p.m.
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Description
Given a list of functional annotation charts and optionally an output directory, this function can output dendrograms, PCA analysis plots and a correlation matrix to make large-scale comparisons easy.
Usage
1 | plotInteractive(input, outDir = NULL, prefix = NULL, pdf = TRUE)
|
Arguments
input |
A list of functional annotation charts. |
outDir |
The directory to save plots to. |
prefix |
The prefix to append to each file, if any. |
pdf |
If true, plots will be pdfs. If false, pngs. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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