SequenceSummaryExecutiveSummary: present an infographic styled executive summary of...
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Arguments
Value
Examples
View source: R/SequencingSummary.R
Description
present an infographic styled executive summary of sequence_summary.txt
content
Usage
1
SequenceSummaryExecutiveSummary(seqsum = NA, flowcellId = "undefined")
Arguments
seqsum
is the data.frame object as prepared by importSequencingSummary
flowcellId
is a label for the plot
Value
file path to ggplot2 format file
Examples
1
2
3
4
5
init()
seqsumFile <- system.file("extdata",
"sequencing_summary.txt.bz2", package = "nanopoRe")
seqsum <- importSequencingSummary(seqsumFile)
plot <- SequenceSummaryExecutiveSummary(seqsum)
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Arguments Value Examples
View source: R/SequencingSummary.R
Description
present an infographic styled executive summary of sequence_summary.txt content
Usage
1 | SequenceSummaryExecutiveSummary(seqsum = NA, flowcellId = "undefined")
|
Arguments
seqsum |
is the data.frame object as prepared by importSequencingSummary |
flowcellId |
is a label for the plot |
Value
file path to ggplot2 format file
Examples
1 2 3 4 5 | init()
seqsumFile <- system.file("extdata",
"sequencing_summary.txt.bz2", package = "nanopoRe")
seqsum <- importSequencingSummary(seqsumFile)
plot <- SequenceSummaryExecutiveSummary(seqsum)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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