Files in rworkflow/ReUseData
Reusable and reproducible Data Management
.BBSoptions
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS
R/ReUseData-package.R
R/annData.R
R/dataHub-class.R
R/dataSearch.R
R/dataUpdate.R
R/getCloudData.R
R/getData.R
R/meta.R
R/recipeHub-class.R
R/recipeLoad.R
R/recipeMake.R
R/recipeSearch.R
R/recipeUpdate.R
README.md
_pkgdown.yml
docs/404.html
docs/LICENSE.html
docs/articles/ReUseData_data.html
docs/articles/ReUseData_quickStart.html
docs/articles/ReUseData_recipe.html
docs/articles/index.html
docs/authors.html
docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js
docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.2.2/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/index.html
docs/link.svg
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/ReUseData-package.html
docs/reference/Rplot001.png
docs/reference/annData.html
docs/reference/dataHub-class.html
docs/reference/dataSearch.html
docs/reference/dataUpdate.html
docs/reference/getCloudData.html
docs/reference/getData.html
docs/reference/index.html
docs/reference/meta_data.html
docs/reference/recipeHub-class.html
docs/reference/recipeLoad.html
docs/reference/recipeMake.html
docs/reference/recipeSearch.html
docs/reference/recipeUpdate.html
docs/search.json
docs/sitemap.xml
inst/extdata/dataRecipes/STAR_index.R
inst/extdata/dataRecipes/bowtie2_index.R
inst/extdata/dataRecipes/echo_out.R
inst/extdata/dataRecipes/ensembl_liftover.R
inst/extdata/dataRecipes/gcp_broad_gatk_hg19.R
inst/extdata/dataRecipes/gcp_broad_gatk_hg38.R
inst/extdata/dataRecipes/gcp_gatk_mutect2_b37.R
inst/extdata/dataRecipes/gcp_gatk_mutect2_hg38.R
inst/extdata/dataRecipes/gencode_annotation.R
inst/extdata/dataRecipes/gencode_genome_grch38.R
inst/extdata/dataRecipes/gencode_transcripts.R
inst/extdata/dataRecipes/hisat2_index.R
inst/extdata/dataRecipes/reference_genome.R
inst/extdata/dataRecipes/salmon_index.R
inst/extdata/dataRecipes/ucsc_database.R
inst/extdata/echo_out.sh
inst/extdata/gencode_transcripts.sh
inst/extdata/meta_gcp.csv
inst/script/doc_extdata.R
man/ReUseData-package.Rd
man/annData.Rd
man/dataHub-class.Rd
man/dataSearch.Rd
man/dataUpdate.Rd
man/getCloudData.Rd
man/getData.Rd
man/meta_data.Rd
man/recipeHub-class.Rd
man/recipeLoad.Rd
man/recipeMake.Rd
man/recipeSearch.Rd
man/recipeUpdate.Rd
tests/testthat.R
tests/testthat/test_data.R
tests/testthat/test_recipes.R
vignettes/.gitignore
vignettes/ReUseData_data.Rmd
vignettes/ReUseData_quickStart.Rmd
vignettes/ReUseData_recipe.Rmd
