reduce: Reduce overlapping numeric ranges to disjoined ranges

In rformassspectrometry/MsCoreUtils: Core Utils for Mass Spectrometry Data

Reduce overlapping numeric ranges to disjoined ranges

Description

The reduce() function reduces the provided numeric ranges to non-overlapping (disjoint) ranges. This is similar to the IRanges::reduce() function, but works with numeric vectors instead of integer ranges (IRanges).

Usage

reduce(start = numeric(), end = numeric(), .check = TRUE)

Arguments

start	numeric with the lower (start) values for each numeric range.
end	numeric with the upper (end) values for each numeric range. Has to match the length of start and all(start <= end) has to be TRUE.
.check	logical(1) whether input parameter validations should be performed. With .check = TRUE (the default) the function checks if the length of input parameters start and end is the same and whether all values in start are <= the values in end.

Value

list of length 2, the first element being the start (mininum) values for the disjoint ranges, the second the end (maximum) values.

Note

The IRanges package defines a reduce() method for IRanges and other S4 classes. This reduce() function is not an S4 method, but a function, thus it is suggested to specifically import it if used in another R package, or to call it with MsCoreUtils::reduce().

Author(s)

Johannes Rainer and Sebastian Gibb

Examples

## Define start and end values for the numeric ranges
s <- c(12.23, 21.2, 13.4, 14.2, 15.0, 43.12)
e <- c(12.40, 24.1, 14.4, 16.2, 15.2, 55.23)

reduce(s, e)

## Empty vectors
reduce()

## Single value
reduce(3.12, 34)

## Non-overlapping ranges
reduce(c(3, 9), c(4, 19))

rformassspectrometry/MsCoreUtils documentation built on April 12, 2025, 6:54 p.m.