result_types: result_types

In reactome/ReactomeGSA: Client for the Reactome Analysis Service for comparative multi-omics gene set analysis

result_types

Description

Retrieves the available result types for the ReactomeAnalysisResult object. Currently, the Reactome Analysis System supports pathways and gene level fold_changes as result types. Not all analysis methods return both data types though. Use the names function to find out which datasets are available in the result object.

Usage

result_types(x)

Arguments

x	ReactomeAnalysisResult.

Value

A cacharacter vector of result types.

See Also

Other ReactomeAnalysisResult functions: get_result(), names,ReactomeAnalysisResult-method, open_reactome(), pathways(), plot_correlations(), plot_gsva_heatmap(), plot_gsva_pathway(), plot_heatmap(), plot_volcano(), reactome_links()

Examples

# load an example result object
library(ReactomeGSA.data)
data(griss_melanoma_result)

# get the available result types
result_types(griss_melanoma_result)

reactome/ReactomeGSA documentation built on Nov. 13, 2023, 11:13 p.m.