plotCycleTime: Plot Cycle Time
In protViz/rawDiag: Brings Orbitrap Mass Spectrometry Data to Life; Fast and Colorful
plotCycleTime R Documentation
Plot Cycle Time
Description
graphs the time difference between two consecutive MS1 scans
(cycle time) with respect to RT (scatter plots) or its density (violin).
A smooth curve graphs the trend. The 95th percentile is indicated by a red
dashed line.
Usage
plotCycleTime(x, method = "trellis")
Arguments
x
a data.frame object adhering to the specified criteria for
the is.rawDiag function.
method
specifying the plot method 'trellis' | 'violin' | 'overlay'.
The default is 'trellis'.
Value
a ggplot object.
Examples
rawrr::sampleFilePath() |> readRaw() |> plotCycleTime()
protViz/rawDiag documentation built on May 4, 2024, 5:35 a.m.
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| plotCycleTime | R Documentation |
Plot Cycle Time
Description
graphs the time difference between two consecutive MS1 scans (cycle time) with respect to RT (scatter plots) or its density (violin). A smooth curve graphs the trend. The 95th percentile is indicated by a red dashed line.
Usage
plotCycleTime(x, method = "trellis")
Arguments
x |
a |
method |
specifying the plot method 'trellis' | 'violin' | 'overlay'. The default is 'trellis'. |
Value
a ggplot object.
Examples
rawrr::sampleFilePath() |> readRaw() |> plotCycleTime()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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