API for pouryany/PanomiR
Detection of miRNAs that regulate interacting groups of pathways
| Global functions | |
|---|---|
| .checkAddressDirs | Source code |
| .cleanEnrichInput | Source code |
| .clusterPlotHelper | Source code |
| .clusterSubPlotHelper | Source code |
| .constrastHelper | Source code |
| .dirChecks | Source code |
| .expandSelector | Source code |
| .getDesignMatHelper | Source code |
| .levelFixerMapper | Source code |
| .mSelectorMaker | Source code |
| .makeSelector | Source code |
| .mkSampleDatDir | Source code |
| .pathSumCleaner | Source code |
| .pathwayCleaner | Source code |
| .qNormalizer | Source code |
| .saveCsvWriter | Source code |
| .shapeColNet | Source code |
| .tScoreMaker | Source code |
| aggInvCoverFn | Man page Source code |
| aggInvFn | Man page Source code |
| aggLogCoverFn | Man page |
| aggLogFn | Man page Source code |
| alignToUniverse | Man page Source code |
| clusterPlot | Man page Source code |
| differentialPathwayAnalysis | Man page Source code |
| enrichAllPairs | Man page Source code |
| getDesignMatrix | Man page Source code |
| getDiffExpTable | Man page Source code |
| getResidual | Man page Source code |
| gscExample | Man page |
| jackKnifeBase | Man page Source code |
| linColumnFinder | Man page Source code |
| mappingPathwaysClusters | Man page Source code |
| methodProbBase | Man page Source code |
| miRNAPathwayEnrichment | Man page Source code |
| miniTestsPanomiR | Man page |
| msigdb_c2 | Man page |
| pCutCoverFn | Man page Source code |
| pCutFn | Man page Source code |
| path_gene_table | Man page |
| pathwayGeneTab | Man page Source code |
| pathwaySummary | Man page Source code |
| pcxnToNet | Man page Source code |
| prioritizeMicroRNA | Man page Source code |
| reportEnrichment | Man page Source code |
| samplingDataBase | Man page Source code |
| sumlogCoverFn | Man page |
| sumlogFn | Man page Source code |
| sumzCoverFn | Man page |
| sumzFn | Man page Source code |
| tableFromGSC | Man page Source code |
| targetScan_03 | Man page |
