buildAssayTab: Prepare assay table mapping info

In pmpsa-hpc/GladiaTOX: R Package for Processing High Content Screening data

Prepare assay table mapping info

Description

This function parses plate annotations and create a mapping between assay endpoints and channels

Usage

buildAssayTab(plate.mtd, chn.map)

Arguments

plate.mtd	Legacy study annotation file from biobanking
chn.map	List of endpoints to thermo channels mapping

Details

Function used only when processing historical data

Value

Table with assay information

Examples

## Load sample data
load(system.file("extdata", "data_for_vignette.rda", package="GladiaTOX"))

# Build assay table
assay <- buildAssayTab(plate, chnmap)

pmpsa-hpc/GladiaTOX documentation built on Sept. 1, 2023, 5:52 p.m.